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Zentralinstitut für Ernährungs- und Lebensmittelforschung (ZIEL)

Abteilung Mikrobiologie
Technische Universität München
Weihenstephaner Berg 3
D-85350 Freising

 
Auswahl Publikationen
 


Loscar ME, Schmid J, Huptas C, Wenning M and Sieber V (2016) Draft genome sequence of Lysinibacillus xylanilyticus SR-86. Genome Announc 16:01317-16

Schmid J, Huptas C and Wenning M (2016) Draft genome of the xanthan producer Xanthomonas campestris LMG 8031. Genome Announc. 16:e00456-15

Lang Halter E, Schober S, Scherer S (2016) Permanent colonization of creek sediments, creek water and limnic water plants by four Listeria species in low population densities. BIOSCIENCES Zeitschrift für Naturforschung, Vol. 71(9-10):335-345

Glück C, Rentschler E, Krewinkel M, Merz M, von Neubeck M, Wenning M, Scherer S, Stoeckel M, Hinrichs J, Stressler T and Fischer L (2016) Thermostability of peptidases secreted by raw milk associated microorganisms. Int. Dairy Journal 56:186-197

Stoeckel M, Friedl N, Achberger V, Lidolt M, Glück C, Krewinkel M, Stressler T, von Neubeck M, Wenning M, Scherer S, Fischer L and Hinrichs J (2016) Growth of Pseudomonas weihenstephanensis, Pseudomonas proteolytica and Pseudomonas sp. in raw milk: Impact of residual heat-stable enzyme activity on stability of UHT milk during shelf-life. Int. Dairy Journal 59:20-28

von Neubeck M, Huptas C, Glück C, Krewinkel M, Stoeckel M, Stressler T, Fischer L, Hinrichs J, Scherer S and Wenning M (2016) Pseudomonas helleri sp. nov. and Pseudomonas weihenstephanensis sp. nov., isolated from raw cow´s milk. Int. J System Evol Microbiol 66:1163-1173

Huptas C, Scherer S and Wenning M (2016) Optimized Illumina PCR-free Library Preparation for bacterial whole Genome sequencing and Analysis of factors influencing de novo assembly. BMC Research Notes 9:269

Böhm M-E, Krey VM, Jeßberger N, Frenzel E, Scherer S (2016) Comparative Bioinformatics and Experimental Analysis of the Intergenic Regulatory Regions of Bacillus cereus hbl and nhe Enterotoxin Operons and the Impact of CodY on Virulence Heterogeneity. Frontiers in Microbiology 7, Article 768

Kutzner, E., Kern, T., Felsl, A., Eisenreich, W., and T. M. Fuchs (2016) Isotopologue profiling of the listerial N-metabolism. Molecular Microbiology 100(2):315-327 

Fellner L, Huptas C, Simon S, Mühlig A, Scherer S, and Neuhaus K
(2016) Draft genome sequences of three European laboratory derivatives from  enterohemorrhagic Escherichia coli O157:H7 strain EDL933, including two plasmids. Genome Announcements 4(2):e01331-15


Müller-Herbst S, Wüstner S, Kabisch J, Pichner R, Scherer S (2016) Acidified nitrite inhibits proliferation of Listeria monocytogenes - Transcriptional analysis of a preservation method. Intern. Journal of Food Microbiology 226:33-41


Neuhaus K, Landstorfer R, Fellner L, Simon S, Schafferhans A, Goldberg T, Marx H,
Ozoline ON, Rost B, Kuster B, Keim DA and Scherer S
(2016) Translatomics combined with transcriptomics and proteomics reveals novel functional, recently evolved orphan genes in Escherichia coli O157:H7 (EHEC).
BMC Genomics 17:133


Kern T, Kutzner E, Eisenreich W, Fuchs TM (2015) Pathogen - nematode interaction: Nitrogen supply of Listeria monocytogenes during growth in Caenorhabditis elegans. Environmental Microbiology Reports 8(1):20-29

Krewinkel M, Baur C, Kranz B, von Neubeck M, Wenning M, Scherer S, Stoeckel M, Hinrichs J, Fischer L (2015) A sensitive and robust method for direct determination of lipolytic activity in natural milk environment. Food Anal Methods, Vol 9, 3:646-655

Kabisch J, Erl-Höning C, Wenning M, Böhnlein C, Gareis M, Pichner R (2015) Spoilage of vacuum-packed beef by the yeast Kazachstania psychrophila. Food Microbiol 53:15-23

Marxen S, Stark TD, Rütschle A, Lücking G, Frenzel E, Scherer S, Ehling-Schulz M, Hofmann T (2015) Multiparametric quantitation of the Bacillus cereus toxins cereulide and isocereulides A-G in Foods. Journal of Agricultural and Food Chemistry 63:8307-8313

Staib L and Fuchs TM (2015) Regulation of fucose and 1,2-propanediol utilization by Salmonella enterica serovar Typhimurium. Frontiers in Microbiol 6:1116

Fellner L, Simon S, Scherling C. Witting M, Schober S, Polte C, Schmitt-Kopplin P, Keim DA, Scherer S, Neuhaus K (2015) Evidence for the recent origin of a bacterial protein-coding, overlapping orphan gene by evolutionary overprinting. BMC Evol Biol 15:283

Simon S, Mittelstädt S, Kwon BC, Stoffel A, Landstorfer R, Neuhaus K, Mühlig A, Scherer S, Keim DA (2015) VisExpress: Visual exploration of differential gene expression data. Info Vis 1-26.

Böhm M-E, Huptas C, Krey V, Scherer S (2015) Massive horizontal gene transfer, strictly vertical inheritance and ancient duplications differentially shape the evolution of Bacillus cereus enterotoxin operons hbl, cytK and nhe. BMC Evolutionary Biology 15:246

Didier A, Jeßberger N, Krey V, Dietrich R, Scherer S, Märtlbauer E (2015) The mutation Glu151Asp in the B-Component of the Bacillus cereus non-hemolytic enterotoxin (Nhe) leads to a diverging reactivity in antibody-based detection system. Toxins 7:4655-4667.

Lücking G, Frenzel F, Rütschle A, Marxen S, Stark TD, Hofmann T, Scherer S, Ehling-Schulz M (2015) Ces locus embedded proteins control the non-ribosomal synthesis of the cereulide toxin in emetic Bacillus cereus on multiple levels. Frontiers in Microbiology 6, Article 1101

Böhm M-E, Huptas C, Krey VM, Scherer S (2015) Draft genome sequence of Bacillus cytotoxicus CVUAS 2833, a very close relative to type strain NVH 391-98 isolated from a different location. Genome Announcements Vol 3, 4 e00901-15

Baur C, Krewinkel M, Kutzli I, Kranz B, von Neubeck M, Wenning M, Scherer S, Stoeckel M, Hinrichs J, Stressler T, Fischer L (2015) Quantification of the proteolytic and lipolytic activity of microorganisms isolated from raw milk. Int Dairy J 49:23-29

Baur C, Krewinkel M, Kutzli I, Kranz B, von Neubeck M, Huptas C, Wenning M, Scherer S, Stoeckel M, Hinrichs J, Stressler T, Fischer L (2015) Isolation and characterization of a heat-resistant peptidase from Pseudomonas panacis withstanding general UHT processes. Int. Dairy J 49:46-55

von Neubeck M, Baur C, Krewinkel M, Stoeckel M, Kranz B, Stressler T, Fischer L, Hinrichs J, Scherer S, Wenning M (2015) Biodiversity of refrigerated raw milk microbiota and their enzymatic spoilage potential. Int J Food Microbiol 211:57-65

Marxen S, Stark TD, Rütschle A, Lücking G, Frenzel E, Scherer S, Ehling-Schulz M, Hofmann T (2015) Depsipeptide intermediates interrogate proposed biosynthesis of cereulide, the emetic toxin of Bacillus cereus.  Science Report 5:10637

Jeßberger N, Krey VM, Rademacher C, Böhm M-E, Mohr A-K, Ehling-Schulz M, Scherer S, Märtlbauer E (2015) From genome to toxicity: a combinatory approach highlights the complexity of enterotoxin production in Bacillus cereus. Frontiers in Microbiology 6, Article 560

Müller A, Huptas C, Wenning M, Schmidt H, Weiss A (2015) Draft genome sequence of Staphylococcus cornosus subsp. utilis LTH 7013, isoladet from  South Tyrolean Ham. Genome Announc. 3, (3) e00456-15

Kläring J, Just S, Lagkouvardos I, Hanske L, Haller D, Blaut M, Wenning M and Clavel T (2015) Murimonas intestine gen. nov., sp. nov. an acetateproducing bacterium of the family Lachnospiraceae isolated from the mouse gut.
IJSEM 65:870-878

Marxen S, Stark TD, Frenzel E, Rütschle A, Lücking G, Pürstlinger G, Pohl EE, Scherer S, Ehling-Schulz M, Hofmann T (2015) Chemodiversity of cereulide, the emetic toxin of Bacillus cereus. Analytical and Bioanalytical Chemistry 407:2439-2453


Daniel H, Moghaddas Gholami A, Berry D, Desmarchelier C, Hahne H, Loh G, Mondot S, Lepage P, Rothballer M, Walker A, Böhm C, Binder U, Wenning M, Skerra A, Wagner M, Blaut M, Schmitt-Kopplin P, Kuster B, Haller D and Clavel T (2014) High fat diets alters gut microbiota physiology in mice. The ISME Journal 8(2):295-308.

Mühlig A, Behr J, Scherer S, Müller-Herbst S
(2014) Stress response of Salmonella enterica serovar Typhimurium to acidified nitrite. Appl Environ Microbiol. Vol. 80, 20:6373-6382 

Grubmüller S, Schauer K, Goebel W, Fuchs TM, Eisenreich W
(2014) Analysis of carbon substrates used by Listeria monocytogenes during growth in J774A.1 macrophages suggests a bipartite intracellular metabolism. Frontiers in Cellular and Infection Microbiology 4,156:1-14

Rothhardt JE, Kröger C, Broadley SP, Fuchs TM (2014) The orphan regulator ReiD of Salmonella enterica is essential for myo-inositol utilization. Molecular Microbiology 94(3):700-712                        

Mühlig A, Kabisch J, Pichner R, Scherer S, Müller-Herbst S (2014) Contribution of the NO-detoxifying enzymes HmpA, NorV and NrfA to nitrosative stress protection of Salmonella Typhimurium in raw sausages. Food microbiology 42:26-33

Kaspar D, Auer F, Schardt J, Schindele F, Ospina A, Held C, Ehrenreich A, Scherer S, Müller-Herbst S (2014) Temperature- and nitrogen source-dependent regulation of GlnR target genes in Listeria monocytogenes. FEMS Microbiol Lett 355:131-141

Wenning M, Breitenwieser F, Konrad R, Huber I, Busch U, Scherer S
(2014) Identification and differentiation of food-related bacteria: A comparison of FTIR spectroscopy and MALDI-TOF mass spectrometry. Journal of Microbiological Methods 103:44-52

Landstorfer R, Simon S, Schober S, Keim D, Scherer S, Neuhaus K (2014) Comparison of strand-specific transcriptomes of enterohemorrhagic Escherichia coli O157:H7 EDL933 (EHEC) under eleven different environmental conditions including radish sprouts and cattle feces. BMC Genomics 15:353

Staib L, Fuchs TM (2014) From food to cell: nutrient exploitation strategies of enteropathogens. Microbiology 160:1020-1039

Müller-Herbst, S, Wüstner S, Krementowski A, Eder D, Fuchs TM, Hedl C, Ehrenreich A, Scherer S (2014) Identification of genes essential for anaerobic growth of Listeria monocytogenes. Microbiology 160:752-765


Starke M und Fuchs TM
(2014) YmoA negatively controls the expression of insecticidal genes in Yersinia enterocolitica. Molecular Microbiology 92(2): 287-301

Cogan TM, Goerges S, Gelsomino R, Larpin S, Hohenegger M, Bora N, Jamet E, Rea MC, Mounier J, Vancanneyt M, Guéguen M, Desmasures N, Swings J, Goodfellow M, Ward AC, Sebastiani H, Irlinger F, Chamba J-F, Beduhn R, Scherer S (2014) Biodiversity of the Surface Microbial Consortia from Limburger, Reblochon, Livarot, Tilsit, and Gubbeen Cheeses. Microbiol Spectrum 2(1):CM-0010-2012. Doi:10.1128/microbiolspec.CM-0010-2012

Reuter, S., Connor, T. R., Barquist, L., Walker, D., Feltwell, T., Harris, S., Fookes, M., Hall, M. E., Fuchs, T. M., Corander, J., Dufour, M., Ringwood, T., Savin, C., Bouchier, C., Martin, L., Miettinen, M., Shubin, M., Laukkanen-Ninios, R., Sihvonen, L. M., Siitonen, A., Skurnik, M., Falcão, J. P., Fukushima, H., Scholz, H. C., Prentice, M., Wren, B. W., Parkhill, J., Carniel, E., Achtman, M., McNally, A., and N. R. Thomson (2014).Parallel independent evolution of pathogenicity within the genus Yersinia.  PNAS Vol. 111 No.18, 6768-6773


       
Fuchs TM, Neuhaus K, Scherer S (2013) Life at Low Temperatures In: Rosenberg et al. (eds) The Prokaryotes – Prokaryotic Communities and Ecophysiology, Springer-Verlag Berlin Heidelberg 2013.

Mir K, Neuhaus K, Bossert M, Schober S (2013) Short Barcodes for Next Generation Sequencing. PLOS one 8(12):e82933 

Seiler H, Wenning M (2013) Virgibacillus halotolerans sp. nov., isolated from a dairy product. Int J Syst Evol Microbiol 63:3358-3363 

Kabisch J, Höning C, Böhnlein C, Pichner R, Gareis M, Wenning M (2013) Kazachstania psychrophila sp. nov., a novel psychrophilic yeast isolated from vacuum-packed beef. Antonie Van Leeuwenhoek 104:925-931 

Fellner L, Bechtel N, Witting M.A. Simon S, Schmitt-Kopplin P, Keim D, Scherer S, Neuhaus K (2013) Phenotype of htgA (mbiA), a recently evolved orphan gene of Escherichia and Shigella, completely overlapping in antisense to yaaW. FEMS Microbiol Lett 350:57-64

Müller J, Hense BA, Fuchs TM, Utz M, Pötzsche Ch (2013) Bet-hedging in stochastically switching environments. J Theor Biol 336:144-157

Lücking G, Stoeckel M, Atamer Z, Hinrichs J, Ehling-Schulz M (2013) Characterization of aerobic spore-forming bacteria associated with industrial dairy processing environments and product spoilage. International Jounal of Food Microbiology 166: 270-270

Starke M, Richter M, and TM Fuchs (2013) The insecticidal toxin genes of Yesinia enterocolitica are activated by the thermolabile LTTR-like regulator TcaR2 at low temperatures. Molecular Mikrobiology 89:596-611 

Wenning M, Scherer S (2013) Identification of microorganisms by FTIR spectroscopy: perspectives and limitations of the method. Appl Microbiol Biotechnol 97:7111-7120 

Grunert T, Wenning M, Barbagelata MS, Fricker M, Sordelli DO, Buzzola F and Ehling-Schulz M (2013) Rapid and reliable identification of Staphylococcus aureus capsular serotypes my means of artificial neural network-assisted Fourier-Transform Infrared Spectroscopy. J Clin Microbiol 51, No. 7:2261-2266 

Doll VM, Ehling-Schulz M, Vogelmann R (2013) Concerted action of Sphingomyelinase and Non-Hemolytic Enterotoxin in Pathogenic Bacillus cereus. PLOS ONE, 8, 4:1-13 

Seiler H, Wenning M, Scherer S (2013) Domibacillus robiginosus gen. nov., sp. nov., isolated from a pharmaceutical clean room. Int J Syst Evol Microbiol 63:2054 – 2061 

Seiler H, Scherer S and Wenning M (2013) Lysinibacillus meyeri sp. nov, isolated from a medical practice. Int J Syst Evol Microbiol 63:1512-1518 

Neuhaus K, Satorhelyi P, Schauer K, Scherer S, Fuchs TM (2013) Acid shock of Listeria monocytogenes at low environmental temperatures induces prfA, epithelial cell invasion, and lethality towards Caenorhabditis elegans. BMC Genomics 2013, 14:285 

Rieser G, Scherer S, Wenning M (2013) Micrococcus cohnii sp. nov., isolated from the air in a medical practice Intern. Journal of Systematic and Evolutionary Microbiology 63:80-85. 

Seiler H, Wenning M, Schmidt V, Scherer S (2013) Bacillus gottheilii sp. nov., isolated from a pharmaceutical manufacturing site. Intern. Journal of Systematic and Evolutionary Microbiology 63:867-872 

Lang Halter E, Neuhaus K, Scherer S (2013) Listeria weihenstephanensis sp. Nov., isolated from the water plant Lemna trisula taken from a freshwater pond. Intern. Journal of Systematic and Evolutionary Microbiology 63:641-647

Stark T, Marxen S, Rütschle A, Lücking G, Scherer S, Ehling-Schulz M, Hofmann T (2013) Mass spectrometic profiling of Bacillus cereus strains and quantitation of the emetic toxin cereulide by means of stable isotope dilution analysis and Hep-2 bioassay. Anal.Bioanal.Chem. 405:191-201


Rieser G, Scherer S, Wenning M (2012)  Naumannella halotolerans gen. nov., sp. nov., a Gram-positive coccus of the family Propionibacteriaceae isolated from a pharmaceutical clean room and from food Int J Syst Evol Microbiol. 62:3042-3048

Mir K, Neuhaus K, Scherer S, Bossert M, Schober S (2012) Predicting statistical properties of open reading frames in bacterial genomes.  PLOS one 7, 9,e45103:1-12

Frenzel E, Doll V, Pauthner M, Lücking G, Scherer S, Ehling-Schulz M (2012) CodY orchestrates the expression of virulence determinants in emetic Bacillus cereus by impacting key regulatory circuits. Molecular Microbiology 85:67-88

Seiler H, Bleicher A, Busse H-J, Hüfner J, Scherer S (2012) Psychroflexus halocasei sp.nov., isolated from a microbial consortium on a cheese. IJSM 62:1850-1856

Schmidt V, Wenning M, Scherer S (2012) Spingobacterium lactis sp.nov. and Sphingobacterium alimentarium sp.nov. isolated from raw mild and a dairy environment. IJSM 62:1506-1511

Seiler H, Schmid V, Wenning M, Scherer S
(2012) Bacillus kochii sp.nov., isolated from foods and a pharmaceuticals manufacturing site. IJSM 62:1092-1097

Fuchs TM, Eisenreich W, Heesemann J, Goebel W (2012) Metabolic adaptation of human pathogenic and related nonpathogenic bacteria to extra- and intracellular habitats. FEMS Micobiol Rev 36:435-462

Schmidt VS, Kaufmann V, Kulozik U, Scherer S, Wenning M (2012) Microbioal biodiversity, quality and shelf life of microfiltered and pasteurized extended shelf life (WSL) milk from Germany, Austria and Switzerland. Int. J. Food Microbiol. 154:1-9

Fuchs TM, Eisenreich W, Kern T, Dandekar T (2012) Toward a systemic understanding of Listeria monocytogenes metabolism during infection. Frontiers in microbiology, Vol.3, 23:1-12.

Maeo M, O´Riodan N, Fuchs TM, Utratna M, Karatzas KAG, O´Byrne C (2012) Thiamine plays a critical role in the acid tolerance of Listeria monocytogenes. FEMS Microbiol Lett 326:137-143
 
Goerges S, Koslowsky M, Velagic S, Borst N, Bockelmann W, Heller KJ, Scherer S (2011) Anti-listerial potential of food-borne yeasts in red smear cheese International Dairy Journal 21:83-89

Larpin-Laborde S, Imran M, Bonaiti C, Bora N, Gelsomino R, Georges S, Irlinger F, Goodfellow M, Ward AC, Vancannevt M, Swings J, Scherer S, Guéguen M, Desmasures N
(2011) Surface microbial consortia from Livarot, a French smear-ripened cheese. Can. J. Microbiol. 57:651-660

Simon S, Oelke D, Landstorfer R, Neuhaus K (2011) Visual analysis of next-generation sequencing data to detect overlapping genes in bacterial genomes. IEEE Symposium on Biological Data Visualization, Providence, Rhode Island, USA, 47-54

Gulitz A, Stadie J, Wenning M, Ehrmann MA, Vogel RF (2011) The microbial diversity of water kefir. Int. Journal of Food Microbiology, Vol. 151, 3:284-288

Büchl NR, Wenning M, Scherer S, Mietke-Hofmann H (2011) Differenzierung von probiotischen und ubiquitären Hefen aus Futtermitteln - Anwendung der Fourier-Transform-Infrarot (FT-IR)-Spektroskopie in der Futtermittelmikrobiologie. In: Hefendifferenzierung aus Futtermitteln, Schriftreihe des Sächsischen Landesamt für Umwelt, Landwirtschaft und Geologie, Dresden, Heft 31:1-34

Wenning M, Scherer S, Mietke-Hofmann H (2011) Differenzierung von probiotischen und ubiquitären Milchsäurebakterien und aeroben Sporenbildnern aus Futtermitteln mittels FTIR-Spektroskopie. In: Differenzierung probiotischer Bakterien, Schriftreihe des Sächsischen Landesamt für Umwelt, Landwirtschaft und Geologie, Dresden, Heft 26:1-35

Büchl NR, Seiler H (2011) Yeast and Molds / Yeasts in Milk and Dairy Products. In: Fuquay JW, Fox PF and McSweeney PLH (eds.). Encyclopedia of Dairy Sciences, 2. Edition, Vol. 4, 744-753

Fuchs TM, Brandt K, Starke M, Rattei T (2011) Shotgun sequencing of Yersinia enterocolitica strain W22703 (biotype 2, serotype O:9) genomic evidence for oscillation between invertebrates and mammals. BMC Genomics 12:168 (1-14)

Samelis J, Bleicher A, Delbés-Paus C, Kakouri A, Neuhaus K, Montel MC (2011) FTIR-based polyphasic identification of lactic acid bacteria isolated from traditional Greek Graviera cheese. Food Microbiology, 28:76-83

Frenzel E, Letzel T, Scherer S, Ehling-Schulz M (2011) Inhibition of cereulide toxin synthesis by emetic Bacillus cereus via long-chain polyphosphates. Applied and Environmental Microbiology, Vol. 77, 4:1475-1482

Dommel MK, Lücking G, Scherer S, Ehling-Schulz M (2011) Transcriptional kinetic analyses of cereulide synthetase genes with respect to growth, sporulation and emetic toxin production in Bacillus cereus. Food Microbiology 28:284-290

Scherer S (2010) Hat die Biologie das Leben erklärt? In: Thim-Mabrey C, Brack-Bernsen L, Täuber D (Hrsg.) Naturwissenschaftliche Aussagen und sozial verantwortbare Entscheidungen. Noderstedt 2010, Seite 133-183

Bhowmick Patit P, Devegowda Devananda, Ruwandeepika Darhanee HA, Fuchs Thilo M, Srikumar Shabarinath, Karunasagar Iddya, Karunasagar Indrani (2011) gcpA (stm1987) is critical for cellulose production and biofilm formation on polystyrene surface by Salmonella enterica serovar Weltevreden in both high and low nutrient medium. Microbial Pathogenesis 50:114-122

Kröger C, Srikumar S, Ellwart J, Fuchs TM (2011) Bistability in myo-inositol utilization by Salmonella enterica serovar Typhimurium. J. Bacteriol. Vol. 193, No.6:1427-1435.

Ehling-Schulz M, Knutson R, Scherer S (2011) Bacillus cereus. In: Fratomico P, Liu Y and Kathariou S eds.: Genomes of Foodborne and Waterborne Pathogens. ASM Press, Washington, Chapter 11, 147-164

Srikumar S, Fuchs TM (2011) Ethanolamine utilization contributes to proliferation of Salmonella enterica serovar Typhimurium in food and in nematodes. Appl. Environ. Microbiol. 77:281-290

Dolowschiak T, Chassin C, Akaddem SB, Fuchs TM, Weiss S, Vandewalle A, Hornef MW (2010) Potentiation of epithelial innate host responses by intercellular communication. PLOS Pathogens Vol.6, 11:1-14.

Schauer K, Geginat G, Liang C, Goebel W, Dandekar T, Fuchs TM (2010) Deciphering the intracellular metabolism of Listeria monocytogenes by mutant screening and modelling. BMC Genomics 2010, 11:573

Kaufmann V, Scherer S, Kulozik U (2010) Verfahren zur Verlängerung der Haltbarkeit von Konsummilch und ihre stofflichen Veränderungen: ESL-Milch. Journal für Verbraucherschutz und Lebensmittelsicherheit 5:59-64.

Bleicher A, Stark T, Hofmann T, Bogovič Matijašić B, Rogelj I, Scherer S, Neuhaus K (2010) Potent antilisterial cell-free supernatants produced by complex red-smear cheese microbial consortia. Journal of Dairy Science 93, No.10:4497-4505
Bleicher A, Obermajer T, Matijašić BB, Scherer S, Neuhaus K (2010) High biodiversity  and potent anti-listerial action of complex red smear cheese microbial ripening consortia. Annals of Microbiol. 60:531-539

Clavel T, Wayne D, Charrier C, Wenning M, Elson C, Haller D (2010) Enterorhabdus caecimuris sp. nov., a member of the family Coriobacteriaceae isolated from a mouse model of spontaneous colitis, and emended description of the genus Enterorhabdus Clavel et al. 2009. IJSEM 60:1527-1531

Spanier B, Starke M, Higel F, Scherer S, Fuchs TM (2010) Yersinia enterocolitica infection and tcaA-dependent killing of Caenorhabditis elegans. Appl. Environ Microbiol. Vol 76, No.18:6277-6285

Trcek J, Fuchs TM, Trülzsch K (2010) Analysis of Yersinia enterocolitica invasion expression in vitro and in vivo using a novel luxCDABE reporter system. Microbiology 156:2734-2745

Neuhaus K, Oelke D, Fürst D, Scherer S, Keim DA (2010) Towards automatic detecting of overlapping genes - Clusters BLAST analysis of viral genomes. In: Pizzuti C, Ritchie MD, Giacobini M (Eds.): EvoBio 2010, LNCA 6023, 228-239

Wenning M, Büchl NR, Scherer S (2010) Species and strain identification of lactic acid bacteria using FTIR spectroscopy and artificial neural networks. J. Biophoton 3, No.8-9:493-505

Büchl NR, Hutzler M, Mietke-Hofmann H, Wenning M, Scherer S (2010) Differentiation of probiotic and environmental Saccharomyces cerevisiae strains in animal feed. Journal of Appl. Microbiology 109:783-791

Bauer T, Stark T, Hofmann T, Ehling-Schulz M (2010) Development of a stable isotope dilution analysis for the quantification of the Bacillus cereus toxin cereulide in foods. J.Agric Food Chem. 58:1420-1428

Dommel MK, Frenzel E, Strasser B, Blöchinger C, Scherer S, Ehling-Schulz M (2010) Identification of the main promoter directing cereulide biosynthesis in emtic Bacillus cereus and its application for real-time monitoring of ces gene expression in foods. Applied and Environmental Microbiology Vol.76, No.4:1232-1240

Schär J, Stoll R, Schauer K, Loeffler DIM, Eylert E, Joseph B, Eisenreich W, Fuchs TM, Goebel W (2010) Pyruvate carboxylase plays a crucial in carbon metabolism of extra- and intracellularly replicating Listeria monocytogenes. J. Bacteriol. Vol 192, No. 7:1774-1784

Kröger C, Stolz J, Fuchs TM (2010) Myo-inositol transport by Salmonella enterica serovar Typhimurium. Microbiology 156:128-138

Monnet C, Bleicher A, Neuhaus K, Sarthou A-S, Leclercq-Perlat M-N, Irlinger F (2010) Assessment of the anti-listerial activity of microfloras from the surface of smear-ripened cheeses. Food Microbiology 27:302-310
 
Dorscht J, Klumpp J, Bielmann R, Schmelcher M, Born Y, Zimmer M, Calendar R, Loessner M (2009) Comarative genome analysis of Listeria Bacteriophages reveals extensive mosaicism, programmed translational frameshifting, and a novel prophage insertion site. Journal of Bacteriology 23:7206-7215

Bleicher A, Neuhaus K, Scherer S (2009) Vibrio casei sp.nov., isolated from the surface of two French red smear soft chesses. Int J Syst Evol Microbiol. 60:1745-1749

Schmidt VS, Mayr R, Wenning M, Glöckner J, Busse HJ, Scherer S (2009) Bavariicoccus seileri gen.nov., sp.nov., isolated from the surface and smear water of German red smear soft chesse. Int J Syst Evol Microbiola 59:2437-2443.

Scherer S (2009) Makroevolution molekularer Maschinen: Konsequenzen aus den Wissenslücken evolutionsbiologischer Naturforschung. In: Hahn HJ, McClary R, Thim-Mabrey C (Hrsg) Atheistischer und jüdisch-christlicher Glaube: Wie wird Naturwissenschaft geprägt? Forschungssymposium vom 02.-04.04.2008 Universität Regensburg, Norderstedt, Seite 95-149.

Schauer K, Stolz J, Scherer S, Fuchs TM (2009) Both thiamine uptake and biosynthesis of thiamine precursors are required for intracellular replication of Listeria monocytogenes. Journal of Bacteriology 191, No. 7:2218-2227.

Lücking G, Dommel M, Scherer S, Fouet A, Ehling-Schulz M (2009) Cereulide synthesis in emetic Bacillus cereus in controlled by the transition state regulator AbrB, but not by the virulence regulator PIcR. Microbiology 155:922-931

Kröger C, Fuchs TM (2009) Characterization of the myo-Iositol Utilization Island of Salmonella enterica serovar Typhimurium. Journal of Bacteriology 191, No. 2:545-554
 
Serra DO, Lücking G, Weiland F, Schulz S, Görg A, Yantorno OM, Ehling-Schulz M (2008) Proteome approaches combined with Fourier transform infrared spectroscopy revealed a distinctive biofilm phyiology in Bordetella pertussis. Proteomics 8:4995-5010

Scherer S, Ehling-Schulz M (2008) Bacillus cereus: Wege zur Prävention der emetischen Toxinbildung in Lebensmitteln. In: "Von der Idee zum Projekt - vom Projekt in die Praxis". Dokumentation der 66. FEI-Jahrestagung 2008. Hrsg. Forschungskreis der Ernährungsindustrie Bonn, 61-72. 

Fuchs TM, Bresolin G, Marcinowski L, Schachtner J, Scherer S (2008) Insecticidal genes of Yersinia spp.: taxonomical distribution, contribution to toxicity towards Manduca sexta and Galleria mellonella, and evolution. BMC Microbiology 8:214.

Büchl N, Wenning M, Seiler H, Mietke-Hofmann H, Scherer S (2008) Reliable identification of closely related Issatchenkia and Pichia species using artificial neural network analysis of Fourier-transform infrared spectra. Yeast 25, 11:787-798

Wenning M, Scherer S, Naumann D (2008) Infrared spectroscopy in the Identification of Microorganisms. Diem M, Griffiths PR, Chalmers JM (eds) Vibrational Spectroscopy for Medical Diagnosis. John Wiley & Son ltd. Chichester England, 71-96.

Heermann R, Fuchs TM (2008) Comparative analysis of the Photorhabdus luminescens and the Yersinia enterocolitica genomes: uncovering candidate genes involved in insect pathogenicity. BMC Genomics 9, 40:1-21

Goerges S, Mounier J, Rea MC, Gelsomino R, Heise V, Beduhn R, Cogan TM, Vancanneyt M, Scherer S (2008) Commercial ripening starter microorganisms inoculated into cheese milk do not successfully themselves in the resident microbial ripening consortia of a South German Red Smear Cheese. Applied and Environmental Microbiology 74, 7:2210-2217

Scherer S, Ehling-Schulz M (2008) Riesiges Genreservoir eines Krankheitserregers. Spektrum der Wissenschaft 4:14-16

Rebuffo-Scheer C, Dietrich J, Wenning M, Scherer S (2008) Identification of five Listeria species based on infrared spectra (FTIR) using macrosamples in superior to a microsample approach. Anal.Bioanal.Chem. 390:1629-1635

Guinebretiére M-H, Thompson FL, Sorokin A, Normand P, Dawyndt P, Ehling-Schulz M, Svensson B, Sanchis V, Nguyen-The C, Heyndrickx M and De Vos P (2008) Ecological diversification in the Bacillus cereus Group. Environmental Microbiology 10:851-865 

Fricker M, Reissbrodt R, Ehling-Schulz M (2008) Evaluation of standard and new chromogenic slective plating media for isolation and identification of Bacillus cereus. Intern. Journal of Food Microbiology 121:27-34

Bresolin G, Trček J, Scherer S, Fuchs TM (2008) Presence of a functional flagellar cluster Flag-2 and low-temperature expression of flagellar genes in Yersinia enterocolitica W22703. Microbiology 154:196-206
 
Scherer S (2007) Bakterielle Endosymbionten von Pflanzenläuse mit stark reduzierten Genomen. Stud. Int. J. 14:66-73
Hain T, Chatterjee SS, Ghai RT, Kuenne CT, Billion A,  Steinweg C, Domann E, Kärst U, Jänsch L, Wehland J, Eisenreich W, Bacher A, Joseph B, Schär J, Kreft J, Klumpp J, Loessner MJ, Dorscht J, Neuhaus K, Fuchs TM, Scherer S, Doumith M, Jacquet C, Martin P, Cossart P, Rusniock C, Glaser P, Buchrieser C, Goebel W and Chakraborty T (2007) Pathogenomics of Listeria spp. Int.J.Med. Microbiol. 297:541-557

Wenning M, Scherer S (2007) Schokolade. Holzapfel W (Hrsg.) Mikrobiologie der Lebensmittel: Lebensmittel pflanzlicher Herkunft. Behr´s Verlag Hamburg 237-250

Jakob K, Satorhelyi P, Lange C, Wendisch VF, Silakowski B, Scherer S, Neuhaus K (2007) Gene expression analysis of Corynebacterium glutamicum subjected to long-term lactic acid adaptation. Journal of Bacteriology Vol. 189, 15:5582-5590.

Wenning M, Seiler H, Scherer S (2007) Auch Bakterien haben Fingerabdrücke: Identifizierung von Mikroorganismen in der Lebensmittelindustrie mittels FTIR-Spektroskopie. DMZ 12:24-27.

Rea MC, Goerges S, Gelsomino R, Brennan NM, Mounier J, Vancanneyt M, Scherer S, Swings J, Cogan TM (2007) Stability of the Biodiversity of the Surface Consortia of Gubbeen, a Red-Smear Cheese. Journal Dairy Sciences 90:2200-2210.

Messelhäusser U, Fricker M, Ehling-Schulz M, Ziegler H, Elmer-Englhard D, Kleih W, Busch U (2007) Real-time-PCR System zum Nachweis von Bacillus cereus (emetischer Typ) in Lebensmitteln. Journal of Consumer Protection and Food, Journal für Verbraucherschutz und Lebensmittelsicherheit 2:190-193.

Scherbel C, Pichner R, Groschup MH, Müller-Hellwig S, Scherer S, Dietrich R, Maertlbauer E, Gareis M (2007) Infectivity of Scrapie Prion Protein (PrPSc) following In vitro Digestion with Bovine Gastrointestinal Microbiota. Zoonoses Public Health 54:185-190.

Santivarangkna C, Wenning M, Foerst P, Kulozik U (2007) Damage of cell envelope of Lactobacillus helveticus during vacuum drying. Journal of Applied Microbiology 102:748-756.

Loessner H, Endmann A, Leschner S, Westphal K, Rhode M, Miloud T, Hämmerling G, Neuhaus K, Weiss S (2007) Remote control of tumor targeted Salmonella enterica serovar Typhimurium - L-arabinose as inducer of bacterial gene expression. Cellular Microbiology 9:1529-1537.

Klumpp J, Fuchs TM (2007) Identification of novel genes in genomic islands that contribute to Salmonella typhimurium replication in macrophages. Microbiology 153:1207-12

Fricker M, Messelhäußer U, Busch U, Scherer S, Ehling-Schulz M (2007) Diagnostic real-time PCR assays for the detection of emetic Bacillus cereus strains in foods and recent food-borne outbreaks. Applied and Evnvironmental Microbiology 73, 6:1892-1898.

Ehling-Schulz M, Scherer S (2007) Ein Keim kommt selten allein - Bacillus cereus als Krankheits- und Verderbniserreger in Lebensmitteln. PdN-BioS 56, 1:18-21. 

Rebuffo-Scheer CA, Schmitt J, Scherer S (2007) Differentiation of Listeria monocytogenes Serovars by using artificial neural networt analysis of Fourier-Transform Infrared Spectra. Applied an Environmental Microbiology 73, 3:1036-1040.

Rebuffo-Scheer CA, Kirschner C, Staemmler M, Naumann D (2007) Rapid species and strain differentiation of non-tubercoulous mycobacteria by Fourier-Transform Infrared 
microspectroscopy. Journal of Microbiological Methods 68, 2:282-290.
 
Mounier, J, Goerges S, Gelsomino R, Vancanneyt M. Vandemeulebroecke K, Hoste B, Brennan NM, Scherer S, Swings J, Fitzgerald GF, Cogan TM (2006) Sources of the adventitious microflora of a smear-ripened cheese. Journal of Applied Microbiology 101:668-681.

Larpin S, Mondoloni C, Goerges S, Vernoux J-P, Gueguen M, Desmasures N (2006) Geotrichum candidum dominates in yeast population dynamics in Livarot, a French red-smear cheese. FEMS Yeast Research 6:1243-1253.

Didier A, Dietrich R, Steffl M, Gareis M, Groschup MH, Müller-Hellwig S, Märtlbauer E, Amselgruber WM (2006) Cellular prion protein in the bovine mammery gland is selectively expressed in active lactocytes. Journal of Histochemistry & Cytochemistry 54(11) 1255-1261.

Magarvey N, Ehling-Schulz M, Walsh CT (2006) Characterization of the cereulide NRPS a-hydroxy acid specifiying modules: Activation of a-keto acids and chiral reduction on the assembly line. J.Am.Chem. Soc. 128:10698-10699.

Scherbel C, Pichner R, Groschup MH, Müller-Hellwig S, Scherer S, Dietrich R, Märtlbauer E, Gareis M (2006) Degradation of scrapie associated prion protein (PrPSC) by the gastrointestinal microbiota of cattle. Vet. Res. 37:695-703.

Ehling-Schulz M, Guinebretiere M-H, Monthán A, Berge O, Fricker M, Svensson B (2006) Toxin gene profiling of enterotoxic and emetic Bacillus cereus. FEMS Microbiol. Lett. 260:232-240.

Bresolin G, Morgan JAW, Ilgen, D, Schere S, Fuchs TM (2006) Low temperature-induced insecticidal activity of Yersinia enterocolitica. Molecular Microbiology 59:503-512.

Wenning M, Theilmann V, Scherer S. (2006) Rapid analysis of two food-borne microbial communities at the species level by Fourier-transform infrared microspectroscopy. Environmental Microbiology 8:848-857

Mayr R, Busse H-J, Worliczek HL, Ehling-Schulz M, Scherer S (2006) Ornithinibacillus gen. nov., with the species Ornithinibacillus bavariensis sp. nov. and Ornithinibacillus californiensis sp. nov.. International Journal of Systematic and Evolutionary Microbiologie 56:1383-1389.

Carlin F, Fricker M, Pielaat A, Heisterkamp S, Shaheen R, Salonen MS, Svensson B, Nguyen-the C, Ehling-Schulz M (2006) Emetic toxin-producing strains of Bacillus cereus show distinct characteristics within the Bacillus cereus group. International Journal of Food Microbiology 109:132-138

Bresolin G, Scherer S, Fuchs TM (2006) Yersinia als Insektenkiller. BIOspektrum 2:171-172.

Ehling-Schulz M, Fricker M, Grallert H, Rieck P, Wagner M, Scherer (2006) Cereulide synthetase gene cluster from emetic Bacillus cereus: Structure and location on a mega virulence plasmid related to Bacillus anthracis toxin plasmid pXO. MBC Microbiology 1-11.

Bresolin G, Neuhaus K, Scherer S, Fuchs TM (2006) Transcriptional analysis of long-term adaptation of Yersinia enterocolitica to low-termperature growth. Journal of Bacteriology Vol. 188, 8:2945-2958.

Shaheen R, Andersson MA, Apetroaie C, Schulz A, Ehling-Schulz M, Ollilainen V-M, Salkinoja-Salonen MS (2006) Potential of selected infant food formulas for production of Bacillus cereus emetic toxin, cereulide. International Journal of Food Mircobiology 107:287-294.

Seiler H, Back W, Bohak I (2006) Desulfosporosinus als Sojadrink-Verderber. Erstmaliger Nachweis von „Desulfosporosinus“ als Sojadrink-Verderber.dmz 4:36-37.

Seiler H, Scherer S (2006) Fingerabdruck überführt Mikroben – Identifizierung von schädlichen Mikroorganismen. BIOforum 1:20-21

Müller-Hellwig S, Groschup MH, Pichner R, Gareis M, Märtlbauer E, Scherer S, Loessner MJ (2006) Biochemical evidence fort he proteolytic degradation of infectious prion protein PrPSC in hamster brain homogenates by foodborne bacteria. In: Systematic an Applied Mircobiology 29:165-171
Rebuffo CA, Schmitt J, Wenning M, Stetten von F, Scherer S (2006) Reliable and rapid identification of Listeria monocytogenes and Listeria Species by artificial neural network-based Fourier transform infrared spectroscopy. Applied and Environmental Microbiology 994-1000.

Bresolin G, Morgan JAW, Ilgen D, Scherer S, Fuchs TM (2006) Low temperature-induced insecticidal activity of Yersinia enterocolitica. Molecular Microbiology 59: 503-512.
Goerges S, Aigner U, Silakowski B, Scherer S (2006) Inhibition of Listeria monocytogenes by Food-Borne Yeasts. In: Applied and Environmental Microbiology 72:313-318.
 
Wright DJ, Smith SC, Joardar V, Scherer S, Jervis J, Warren A, Helm RF, Potts M (2005) UV Irradiation and desiccation modulate the three-dimensional extracellular matrix of nostoc commune (Cyanobacteria). The Journal of Biological Chemistry VOL 280, 48:40271 – 40281.
Fuchs TM, Klumpp J, Przybilla K (2005) Insertion-duplication mutagenesis (IDM) of Salmonella enterica and related species using a novel thermosensitive vector. Plasmid 55:39-49.

Mounier J, Gelsomino R, Goerges S, Vancanneyt M, Vandemeulebroecke K, Scherer S, Swings J, Fitzgerald GF, Cogan TM (2005) Surface Microflora of Four Smear-Ripened cheeses.  Applied and Environmental Microbiology 6489-6500.
Middendorf B, Stübs D, Guiso N, Deppisch H, Gross R, Fuchs TM (2005)  Phg, a novel member of the autotransporter family present in Bordetella species. Microbiological Research 160:329-336.
Stübs D, Fuchs T M, Schneider B, Bosserhoff A, Gross R (2005) Identification and regulation of cold inducible factors of Bordetella bronchiseptica. Microbiology 151:1911-1917.
Fuchs TM (2005) Reduzierte Genome und das Konzept eines minimalen Gensets. Genomxpress 1:22 – 24

Seiler H (2005) Steckbrief mikrobiologische Terroristen bedrohen die Sicherheit unserer Lebensmittel und müssen verhütet und bekämpft werde… Deutsche Milchwirtschaft 56 Titelblatt

Neuhaus K, Scherer S (2005) Life at low temperature. M. Dworkin et al.,
eds., The Prokaryotes: An Evolving Electronic Resource for the Microbiological
Community, (2005) 3rd edition, release 4.0, Springer-Verlag, New York.

Ehling-Schulz M, Vukov N, Schulz A, Shaheen R, Andersson M, Märtlbauer E, Scherer S (2005) Identification and Partial Characterization of the Nonribosomal Peptide Synthetase Gene Responsible for Cereulide Production in Emetic Bacillus cereus. Applied and Environmental Microbiology 71:105-113.

Ehling-Schulz M, Svensson B, Guinebretiere M-H, Lindbäck T, Andersson M, Schulz A, Fricker M, Christiansson A, Granum PE, Märtlbauer E,      Nguyen-The C, Salkinoja-Salonen M, Scherer S (2005) Emetic toxin formation of            Bacillus cereus is restricted to a single evolutionary lineage of closely related strains.  Microbiology 151:183-197.
 
Ehling-Schulz M, Fricker M, Scherer S (2004) Bacillus cereus, the causative agent of an emetic type of food-borne illness. Molecular Nutrition Food Research 48:479-487.

Brennan NM, Cogan TM, Loessner M, Scherer S (2004) Bacterial Surface-ripened Cheeses. Cheese – Chemistry, Physics and Microbiology 2 (Elsevier Academic Press, Amsterdam, 2004) 199-225.

Ehling-Schulz M, Fricker M, Scherer S (2004) Identification of emetic toxin producing Bacillus cereus strains by a novel molecular assay. FEMS Microbiol Lett. 232:189-195.

Knuth K, Niesalla H, Hueck CJ, Fuchs TM (2004) Large-scale identification of essential Salmonella genes by trapping lethal insertions. Molecular Microbiology 51:1729-1744.

Mayr R, Gutser K, Busse M, Seiler H (2004) Indigenous aerobic sporeformers in high   heat treated (127°C, 5 s) German ESL (Extended Shelf Life) milk. Milchwissenschaft 59:143-146.

Mayr R, Fricker M, Maoz A, Scherer S (2004) Anti-listerial activity and biodiversity of cheese surface cultures: influence of the ripening temperature regime. Eur Food Res Technol 218:242-247.

Mayr R, Gutser K, Busse M, Seiler H (2004) Gram positive non-sporeforming recontaminants are frequent spoilage organisms of German retail ESL (Extended Shelf Life) milk. Milchwissenschaft 59:262-266.

Seiler H (2004) Beurteilung von Keimen bei der Schadensfallanalyse. DMZ 125:31-35.
 
Seiler H (2003)  Warum stinkt Käse genauso wie Käsefüße? DMZ 124:24-27.

Loessner M, Guenther S, Steffan S, Scherer S (2003) A Pediocin-Producing Lactobacillus plantarum Strain Inhibits Listeria monocytogenes in a Multispecies Cheese Surface Microbial Ripening Consortium. Applied and Environmental Microbiology 69:1854-1857.

Vukov N, Moll I, Bläsi U, Scherer S, Loessner M (2003) Functional regulation of the Listeria monocytogenes bacteriophage A 118 holin by an intragenic inhibitor lacking the first transmembrane domain. – In: Molecular Microbiology 48:173-186.

Oberreuter H, Brodbeck A, von Stetten S, Goerges S, Scherer S (2003) Fourier-transform infrared (FT-IR) spectroscopy is a promising tool for monitoring the population dynamics of microorganisms in food stuff. Eur Food Res Technol 216:434-439.

Seiler H, Scherer S (2003) FTIR-Spektrenbibliotheken für die Identifizierung von Mikroorganismen. BIOspektrum 9:369-371.

Seiler H (2003)  Mikrobiologische Fehleranalysen mit FTIR-Spektroskopie. DMZ 124:24-28.

Seiler H (2003)  A review: Yeasts in kefir and kumiss. Milchwissenschaft 58:392-396.

Scherer S, Junker R (2003)  Evolution. – In: Enzyklopädie Naturwissenschaft und Technik, 8. Ergänzungslieferung, Februar 2003, ecomed verlagsgesellschaft AG & Co.KG, Landsberg/Lech, Sonderdruck 1-10.

Maoz A, Mayr R, Scherer S (2003) Temporal Stability and Biodiversity of Two Complex Antilisterial Cheese-Ripening Microbial Consortia. Applied and Environmental Microbiology 69:4012-4018.

Zimmer M, Sattelberger E, Inman R, Calendar R, Loessner M (2003) Genome and proteome of Listeria monocytogenes phage PSA: an unusual case for programmed + 1 translational frameshifting in structural protein synthesis. Molecular Microbiology 50:303-317.

Mayer A, Seiler H, Scherer S (2003) Isolation of bifidobacteria from food and human faeces and rapid identification by Fourier transform infrared spectroscopy. Annals of Microbiology 53:299-313.

Neuhaus K, Anastasov N, Kaberdin V, Francis K, Miller V, Scherer S (2003) The AGUAAA motif in cspA1/A2 mRNA is important for adaptation of Yersinia enterocolitica to grow at low temperature. Molecular Microbiology 50:1629-1645.

Loewe L, Textor V, Scherer S (2003) High Deleterious Genomic Mutation Rate in Stationary Phase of Escherichia coli. Science 302:1558-1560.
 
Ehling-Schulz M, Schulz S, Wait R, Görg A, Scherer S (2002) The UV-B stimulon of the terrestrial cyanobacterium Nostoc commune comprises early shock proteins and late acclimation proteins. Molecular Microbiology 46:827-843.

Loessner M, Scherer S (2002) Listerien - Aktuelle Lage und Entwicklung neuer Schutz- und Reifungskulturen. Teil II. DMZ 123:217-221.

Loessner MJ, Kramer K, Ebel F, Scherer S (2002) C-terminal domains of Listeria monocytogenes bacteriophage murein hydrolases determine specific recognition and high-affinity binding to bacterial cell wall carbohydrates. Molecular Microbiology 44:335-349

Loewe L (2002) evolution @home: Experiences with work units that span more than 7 orders of magnitude in computational complexity. HE Bal et al. (eds.) Proceedings of the 2nd IEEE/ACM International Symposium on Cluster Computing and the Grid (CCGrid2002), Berlin, Germany, IEEE Computer Society 425-431.

Loewe L (2002) Global computing for bioinformatics – In: Briefings in Bioinformatics Vol. 3, 4:377-388

Maoz A, Mayr R, Bresolin G, Neuhaus K, Francis KP, Scherer S (2002) Sensitive In Situ Monitoring of a Recombinant Bioluminescent Yersinia enterocolitica Reporter Mutant in Real Time on Camembert Cheese. Applied and Environmental Microbiology 68: 5737-5740.

Oberreuter H, Seiler H, Scherer S (2002) Identification of coryneform bacteria and related taxa by Fourier-transform infrared (FT-IR) spectroscopy.  International Journal of Systematic and Evolutionary Microbiology 52:91-100.

Oberreuter H, Charzinski J, Scherer S (2002) Intraspecific diversity of Brevibacterium linens, Corynebacterium glutamicum and Rhodococcus erythropolis based on partial 16S rDNA sequence analysis and Fourier-transform infrared (FT-IR) spectroscopy. Microbiology 148:1523-1532.

Scherer S, Loessner M (2002) Listerien - Aktuelle Lage und Entwicklung neuer Schutz- und Reifungskulturen. Teil 1. DMZ 123:173-178.

Scherer S, Seiler H (2002) Computergestütztes Identifizierungssystem (FTIR-Technologie) für Starterkulturen und Verderbsorganismen in der Lebensmittelindustrie. – In: Dokumentation der 60. FEI-Diskussionstagung 2002 und der Kölner FoodTec-Tage 49-54.

Seiler H (2002) Yeasts in Milk and Milk Products. Encyclopedia of Dairy Sciences edited by Roginski H, Fuquay JW, Fox PF, Academic Press, 2761-2769

Zimmer M, Scherer S, Loessner MJ (2002) Genomic analysis of Clostridium perfringens Bacteriophage f 3626, which integrates into guaA and possibly affects sporulation. Journal of Bacteriology 184:4359-4368

Wenning M, Seiler H, Scherer S (2002) Fourier-Transform Infrared Microspectroscopy, a novel and rapid tool for identification of Yeasts. Applied and Environmental Microbiology 68:4717-4721. 

Zimmer M, Vukov N, Scherer S, Loessner MJ (2002) The murein hydrolase of the bacteriophage f 3626 dual lysis system is active against all tested Clostridium perfringens strains. Applied and Environmental Microbiology 68:5311-5317.

Stenfors LP, Mayr R, Scherer S, Granum PE (2002) Pathogenic potential of fifty Bacillus weihenstephanensis strains.  FEMS Microbiology Letters 215:47-51.

Zimmer M, Scherer S, Loessner MJ (2002) Mit den Waffen des Feindes: Eine virale Murein-Hydrolase zur Zerstörung von Clostridium perfingens. Hyg. Mikrobiol. 6:55-59


 

Aktuelles

Stellenausschreibung
Doktorand(in) im Fach Mikrobiologie zum Thema "Regulation der Peptidaseproduktion bei Pseudomonas"

Forschungspreis
Otto-von-Guericke Forschungspreis für Siegfried Scherer

Preisverleihung
Innovationspreis für Siegfried Scherer

Paper
Spoilage of Microfiltered and Pasteurized Extended Shelf Life Milk Is Mainly Induced by Psychrotolerant Spore-Forming Bacteria that often Originate from Recontamination

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Transcriptional and translational regulation by RNA thermometers, riboswitches and the sRNA DsrA in Escherichia coli O157:H7 Sakai under combined cold and osmotic stress adaptation. (2016)

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Hysteresis in myo-inositol utilization by Salmonella Typhimurium (2016)

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Probiotic Enterococcus faecalis Symbioflor® down regulates virulence genes of EHEC in vitro and decrease pathogenicity in a Caenorhabditis elegans model (2017)

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Draft Genome Sequence of Lysinibacillus xylanilyticus SR-86 (Nov. 2016)

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Permanent colonization of creek sediments, creek water and limnic water plants by four Listeria species in low population densities (November 2016)

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Draft Genome Sequence of the Xanthan Producer Xanthomonas campestris LMG 8031 (Oktober 2016)

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Comparative Bioinformatics and Experimental Analysis of the Intergenic Regulatory Regions of Bacillus cereus hbl and nhe Enterotoxin Operons and the Impact of CodY on Virulence Heterogeneity (Mai 2016)

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Regulation of fucose and 1,2-propanediol utilization by Salmonella enterica serovar Typhimurium (März 2016)

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Acidified nitrite inhibits proliferation of Listeria monocytogenes - Transcriptional analysis of a preservation method (März 2016)

Berufung Expertenrat
Prof. Dr. Siegfried Scherer wurde in den Expertenrat für Lebensmittelsicherheit des Bayerischen Staatsministeriums für Umwelt und Verbraucherschutz berufen.

Paper
Translatomics combined with transcriptomics and proteomics reveals novel functional, recently evolved orphan genes in Escherichia coli O157:H7 (EHEC)

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A sensitive and robust method for direct determination of lipolytic activity in natural milk environment (März 2016, online first)

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Evidence for the recent origin of a bacterial protein-coding, overlapping orphan gene by evolutionary overprinting (Dez. 2015).

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Massive horizontal gene transfer, strictly vertical inheritance and ancient duplications differentially shape the evolution of Bacillus cereus enterotoxin operons hbl, cytK and nhe (Nov. 2015)

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Chemodiversity of cereulide, the emetic Toxin of Bacillus cereus (2015)